Pairwise fitting emdb-5034 on emdb-1319 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1319 by gmfit(PID:4142352).





RANK[1] Corr.Coeff:0.502

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1319)

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color:


Octomeric pyruvate-ferredoxin oxidoreductase from Desulfovibrio vulgaris. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.502
0.499
0.496
0.494
0.490
0.490
0.488
0.488
0.378
0.375







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1319.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.482663,-0.875385,-0.027149 178.421454 center 0,0,0 model #1
move 252.080437,50.665612,169.885757 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!