Pairwise fitting emdb-5034 on emdb-1245 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1245 by gmfit(PID:3799597).





RANK[1] Corr.Coeff:0.470

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1245)

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Structural analysis of the anaphase-promoting complex reveals multiple active sites and insights into polyubiquitylation. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.470
0.459
0.402
0.399
0.384
0.381
0.371
0.370
0.366
0.362







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1245.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.829869,-0.284999,-0.479681 26.559374 center 0,0,0 model #1
move -200.881640,-202.127048,-134.309224 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!