Pairwise fitting emdb-5034 on emdb-1174 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1174 by gmfit(PID:3853670).





RANK[1] Corr.Coeff:0.452

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

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Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1174)

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Structural analysis of the anaphase-promoting complex reveals multiple active sites and insights into polyubiquitylation. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.452
0.447
0.433
0.422
0.413
0.408
0.405
0.382
0.375
0.371







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1174.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.262916,0.268248,0.926779 21.191490 center 0,0,0 model #1
move -124.909497,-253.061925,-141.672721 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!