Pairwise fitting emdb-5034 on emdb-1170 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-1170 by gmfit(PID:4116406).





RANK[1] Corr.Coeff:0.436

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-1170)

display:



color:


Structural roles for human translation factor eIF3 in initiation of protein synthesis. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.436
0.382
0.369
0.359
0.355
0.345
0.337
0.321
0.244
0.241







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1170.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.624854,0.780639,-0.012645 160.833414 center 0,0,0 model #1
move 175.407607,178.903166,544.947043 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!