Pairwise fitting emdb-1975 on pdb-5fkx by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-5fkx by gmfit(PID:3011830).





RANK[1] Corr.Coeff:0.263

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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color:



Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-5fkx)

display:



color:


b'STRUCTURE OF E.COLI INDUCIBLE LYSINE DECARBOXYLASE AT ACTIVE PH       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.263
0.214
0.208
0.200
0.197
0.189
0.186
0.186
0.178
0.174







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fkx"(PDB-format) or 
 "5fkx"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.228664,0.288870,0.929660 148.837708 center 0,0,0 model #1
move 359.731801,5.189061,-121.187603 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!