Pairwise fitting emdb-1975 on pdb-3j0f by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-3j0f by gmfit(PID:4104390).





RANK[1] Corr.Coeff:0.439

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-3j0f)

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b'SINDBIS VIRION                                                        ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.439
0.351
0.349
0.343
0.343
0.342
0.341
0.332
0.328
0.327







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0f"(PDB-format) or 
 "3j0f"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.197803,0.971185,0.132941 140.069760 center 0,0,0 model #1
move -5.853027,-244.473865,469.403605 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!