Pairwise fitting emdb-1975 on pdb-2go5 by gmfit










Pairwise fitting of target emdb-1975 on reference pdb-2go5 by gmfit(PID:36287).





RANK[1] Corr.Coeff:0.425

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1975)

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Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1975)]







REFERENCE(pdb-2go5)

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b'STRUCTURE OF SIGNAL RECOGNITION PARTICLE RECEPTOR (SR) IN             ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.425
0.402
0.378
0.355
0.349
0.342
0.318
0.313
0.302
0.248







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2go5"(PDB-format) or 
 "2go5"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1975.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.807204,-0.245411,-0.536838 148.810978 center 0,0,0 model #1
move -271.950084,30.315828,-104.566229 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!