Pairwise fitting emdb-1975 on emdb-8125 by gmfit



Pairwise fitting of target emdb-1975 on reference emdb-8125 by gmfit(PID:1393567).

RANK[1] Corr.Coeff:0.544 [JSmol] [Molmil]
TARGET(emdb-1975)
display:
color:
Functional reconstitution of the 13-subunit human translation initiation factor eIF3. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1975)]
REFERENCE(emdb-8125)
display:
color:
BG505 SOSIP.664 HIV-1 Env trimer in complex with anti-HIV fusion peptide targeting N123-VRC34.01 Fab [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.544 0.429 0.420 0.417 0.413 0.403 0.388 0.385 0.382 0.351

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8125.map.gz", and read it.
  2. Download the Target map "emd_1975.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.129915,-0.047644,0.990380 166.954343 center 0,0,0 model #1
    move 322.744313,328.429063,-136.266533 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!