Pairwise fitting emdb-1936 on emdb-1943 by gmfit










Pairwise fitting of target emdb-1936 on reference emdb-1943 by gmfit(PID:1529707).





RANK[1] Corr.Coeff:0.866

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1936)

display:



color:



N42 Rabbit Hemorrhagic Disease Virus (RHDV) T3 capsid [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1936)]







REFERENCE(emdb-1943)

display:



color:


Feline Calicivirus strain F9 decorated with Junctional Adhesion Molecule A [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.866
0.860
0.856
0.848
0.847
0.845
0.843
0.841
0.840
0.839







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1943.map.gz", and read it.

  2.  Download the Target map "emd_1936.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.550411,0.588608,0.592105 120.596644 center 0,0,0 model #1
move -1.570933,1.007800,0.668088 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!