Pairwise fitting emdb-1908 on pdb-4bon by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-4bon by gmfit(PID:2479170).





RANK[1] Corr.Coeff:0.662

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

display:



color:



Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-4bon)

display:



color:


b'THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.662
0.649
0.586
0.584
0.524
0.508
0.471
0.454
0.441
0.418







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4bon"(PDB-format) or 
 "4bon"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.960896,0.157244,-0.227933 176.212584 center 0,0,0 model #1
move 140.117108,318.756093,433.060579 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!