Pairwise fitting emdb-1908 on pdb-4aq9 by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-4aq9 by gmfit(PID:2087939).





RANK[1] Corr.Coeff:0.676

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

display:



color:



Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-4aq9)

display:



color:


b'GATING MOVEMENT IN ACETYLCHOLINE RECEPTOR ANALYSED BY TIME- RESOLVED  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.676
0.657
0.590
0.588
0.534
0.515
0.471
0.462
0.445
0.425







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4aq9"(PDB-format) or 
 "4aq9"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.970768,0.054327,0.233791 177.926128 center 0,0,0 model #1
move 32.594200,180.261653,265.327478 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!