Pairwise fitting emdb-1908 on pdb-3j3p by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-3j3p by gmfit(PID:3990249).





RANK[1] Corr.Coeff:0.636

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-3j3p)

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color:


b'CONFORMATIONAL SHIFT OF A MAJOR POLIOVIRUS ANTIGEN CONFIRMED BY       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.636
0.586
0.515
0.461
0.445
0.427
0.418
0.418
0.370
0.324







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j3p"(PDB-format) or 
 "3j3p"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.493239,-0.502960,-0.709751 120.467365 center 0,0,0 model #1
move -65.592749,-16.861463,-7.575339 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!