Pairwise fitting emdb-1908 on pdb-2ww9 by gmfit










Pairwise fitting of target emdb-1908 on reference pdb-2ww9 by gmfit(PID:3598842).





RANK[1] Corr.Coeff:0.561

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

display:



color:



Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(pdb-2ww9)

display:



color:


b'CRYO-EM STRUCTURE OF THE ACTIVE YEAST SSH1 COMPLEX BOUND TO THE YEAST ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.561
0.517
0.517
0.508
0.459
0.452
0.442
0.434
0.429
0.407







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2ww9"(PDB-format) or 
 "2ww9"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.825967,-0.500364,-0.259643 110.610917 center 0,0,0 model #1
move 149.903472,144.248611,-82.815605 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!