Pairwise fitting emdb-1908 on emdb-5701 by gmfit










Pairwise fitting of target emdb-1908 on reference emdb-5701 by gmfit(PID:2384494).





RANK[1] Corr.Coeff:0.638

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1908)

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color:



Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1908)]







REFERENCE(emdb-5701)

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color:


Negative stained image reconstruction of HIV KNH11444 subtype A SOSIP.681.dV1V2V3 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.638
0.593
0.591
0.559
0.547
0.527
0.507
0.453
0.446
0.434







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5701.map.gz", and read it.

  2.  Download the Target map "emd_1908.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.650480,0.724314,-0.228572 162.840277 center 0,0,0 model #1
move 88.996835,131.186342,357.125959 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!