Pairwise fitting emdb-1908 on emdb-2992 by gmfit



Pairwise fitting of target emdb-1908 on reference emdb-2992 by gmfit(PID:1084457).

RANK[1] Corr.Coeff:0.609 [JSmol] [Molmil]
TARGET(emdb-1908)
display:
color:
Unique structure of iC3b by 3D-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1908)]
REFERENCE(emdb-2992)
display:
color:
Structure of a pre-catalytic retroviral Intasome bound to a human nucleosome [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.609 0.563 0.531 0.526 0.491 0.484 0.478 0.463 0.457 0.442

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2992.map.gz", and read it.
  2. Download the Target map "emd_1908.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.461451,0.465920,0.754971 67.218805 center 0,0,0 model #1
    move 130.431070,-63.960943,140.409415 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!