Pairwise fitting emdb-1849 on pdb-5mdz by gmfit



Pairwise fitting of target emdb-1849 on reference pdb-5mdz by gmfit(PID:1240415).

RANK[1] Corr.Coeff:0.938 [JSmol] [Molmil]
TARGET(emdb-1849)
display:
color:
Cognate 70S-TC complex [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1849)]
REFERENCE(pdb-5mdz)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.938 0.758 0.753 0.738 0.733 0.716 0.711 0.711 0.710 0.703

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5mdz"(PDB-format) or "5mdz"(mmCIF-format), and read it.
  2. Download the Target map "emd_1849.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.459938,-0.672285,-0.580078 111.977348 center 0,0,0 model #1
    move 211.854796,209.127434,211.928951 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!