Pairwise fitting emdb-1836 on emdb-8100 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-8100 by gmfit(PID:1528556).

RANK[1] Corr.Coeff:0.933 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-8100)
display:
color:
Structure of the R432A variant of Adeno-associated virus type 2 VLP [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.933 0.910 0.897 0.897 0.896 0.887 0.887 0.886 0.885 0.884

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8100.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.703533,0.144542,0.695808 111.381214 center 0,0,0 model #1
    move 77.352272,191.953768,-96.945594 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!