Pairwise fitting emdb-1836 on emdb-6470 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-6470 by gmfit(PID:4108020).





RANK[1] Corr.Coeff:0.941

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-6470)

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Single particle reconstruction of AAV-DJ in complex with ARIXTRA [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.941
0.899
0.897
0.896
0.878
0.877
0.876
0.875
0.873
0.872







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6470.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.157661,0.704139,0.692337 109.766089 center 0,0,0 model #1
move 262.080460,-15.813260,161.570563 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!