Pairwise fitting emdb-1836 on emdb-5161 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-5161 by gmfit(PID:3540564).





RANK[1] Corr.Coeff:0.383

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

display:



color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-5161)

display:



color:


PsV-F [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.383
0.255
0.251
0.249
0.246
0.246
0.245
0.245
0.245
0.244







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5161.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.237565,-0.223570,-0.945293 161.217296 center 0,0,0 model #1
move 153.430798,160.902307,-182.793977 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!