Pairwise fitting emdb-1836 on emdb-1879 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-1879 by gmfit(PID:4060161).





RANK[1] Corr.Coeff:0.822

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-1879)

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Mutually-induced conformational switching of RNA and coat protein underpins efficient assembly of a viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.822
0.820
0.815
0.815
0.812
0.810
0.810
0.809
0.809
0.805







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1879.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.482307,0.754357,-0.445338 99.926023 center 0,0,0 model #1
move -61.207129,253.601204,333.455818 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!