Pairwise fitting emdb-1833 on pdb-4uqj by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-4uqj by gmfit(PID:3649334).





RANK[1] Corr.Coeff:0.397

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-4uqj)

display:



color:


b'CRYO-EM DENSITY MAP OF GLUA2EM IN COMPLEX WITH ZK200775               ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.397
0.331
0.303
0.301
0.287
0.264
0.259
0.245
0.236
0.229







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4uqj"(PDB-format) or 
 "4uqj"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.512419,0.637563,0.575274 136.394902 center 0,0,0 model #1
move 287.608351,285.782679,315.579499 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!