Pairwise fitting emdb-1833 on pdb-3zpz by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-3zpz by gmfit(PID:3583135).





RANK[1] Corr.Coeff:0.551

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-3zpz)

display:



color:


b'VISUALIZING GROEL-ES IN THE ACT OF ENCAPSULATING A NON-NATIVE         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.551
0.528
0.525
0.473
0.471
0.451
0.447
0.437
0.414
0.398







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3zpz"(PDB-format) or 
 "3zpz"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.740657,0.409887,0.532372 119.681554 center 0,0,0 model #1
move 9.066064,-0.835429,11.969053 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!