Pairwise fitting emdb-1833 on pdb-3j96 by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-3j96 by gmfit(PID:3482940).





RANK[1] Corr.Coeff:0.502

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-3j96)

display:



color:


b'STRUCTURE OF 20S SUPERCOMPLEX DETERMINED BY SINGLE PARTICLE           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.502
0.476
0.409
0.385
0.382
0.370
0.368
0.346
0.339
0.328







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j96"(PDB-format) or 
 "3j96"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.853845,0.430284,-0.292924 66.989426 center 0,0,0 model #1
move 6.627798,7.893535,-3.943743 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!