Pairwise fitting emdb-1833 on pdb-2yew by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-2yew by gmfit(PID:3978527).





RANK[1] Corr.Coeff:0.403

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-2yew)

display:



color:


b'MODELING BARMAH FOREST VIRUS STRUCTURAL PROTEINS                      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.403
0.372
0.361
0.339
0.330
0.328
0.302
0.293
0.269
0.259







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2yew"(PDB-format) or 
 "2yew"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.957884,0.250592,-0.140217 98.099032 center 0,0,0 model #1
move 80.255918,50.754764,247.610080 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!