Pairwise fitting emdb-1833 on emdb-3356 by gmfit










Pairwise fitting of target emdb-1833 on reference emdb-3356 by gmfit(PID:3558670).





RANK[1] Corr.Coeff:0.438

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

display:



color:



Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(emdb-3356)

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color:


Activation of NMDA receptors and the mechanism of inhibition by ifenprodil - Class Y [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.438
0.422
0.402
0.402
0.341
0.292
0.286
0.284
0.283
0.277







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3356.map.gz", and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.407743,0.692034,-0.595680 89.903227 center 0,0,0 model #1
move 174.842869,170.652418,153.885068 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!