Pairwise fitting emdb-1770 on pdb-4adv by gmfit










Pairwise fitting of target emdb-1770 on reference pdb-4adv by gmfit(PID:2479487).





RANK[1] Corr.Coeff:0.833

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(pdb-4adv)

display:



color:


b'STRUCTURE OF THE E. COLI METHYLTRANSFERASE KSGA BOUND TO THE E. COLI  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.833
0.711
0.613
0.587
0.584
0.575
0.567
0.550
0.549
0.483







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4adv"(PDB-format) or 
 "4adv"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.707628,-0.705423,-0.040511 175.369823 center 0,0,0 model #1
move 199.946343,186.427020,192.397776 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!