Pairwise fitting emdb-1770 on emdb-3306 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3306 by gmfit(PID:846390).





RANK[1] Corr.Coeff:0.459

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

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color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3306)

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color:


Structure of human TFIID-IIA bound to core promoter DNA (locally-refined lobe C) [Ngauss:19]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.459
0.435
0.434
0.419
0.409
0.370
0.362
0.342
0.317
0.314







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3306.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.727894,-0.535114,0.428747 121.371735 center 0,0,0 model #1
move 216.536757,255.812140,222.852184 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!