Pairwise fitting emdb-1770 on emdb-3048 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-3048 by gmfit(PID:2257957).





RANK[1] Corr.Coeff:0.858

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

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30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-3048)

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Structure of a partial yeast 48S preinitiation complex in closed conformation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.858
0.748
0.674
0.671
0.661
0.651
0.650
0.637
0.536
0.526







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3048.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.745370,0.656778,0.114310 169.074513 center 0,0,0 model #1
move 202.469758,195.409194,199.107190 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!