Pairwise fitting emdb-1737 on pdb-4uqq by gmfit










Pairwise fitting of target emdb-1737 on reference pdb-4uqq by gmfit(PID:4062568).





RANK[1] Corr.Coeff:0.524

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(pdb-4uqq)

display:



color:


b'ELECTRON DENSITY MAP OF GLUK2 DESENSITIZED STATE IN COMPLEX WITH 2S,  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.524
0.490
0.489
0.489
0.422
0.421
0.410
0.409
0.312
0.307







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4uqq"(PDB-format) or 
 "4uqq"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.429060,-0.875500,0.222276 85.755400 center 0,0,0 model #1
move 462.558021,271.024928,108.716338 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!