Pairwise fitting emdb-1737 on pdb-4ab3 by gmfit



Pairwise fitting of target emdb-1737 on reference pdb-4ab3 by gmfit(PID:1603819).

RANK[1] Corr.Coeff:0.553 [JSmol] [Molmil]
TARGET(emdb-1737)
display:
color:
Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1737)]
REFERENCE(pdb-4ab3)
display:
color:
b'ATP-TRIGGERED MOLECULAR MECHANICS OF THE CHAPERONIN GROEL ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.553 0.535 0.534 0.532 0.531 0.519 0.519 0.519 0.429 0.429

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4ab3"(PDB-format) or "4ab3"(mmCIF-format), and read it.
  2. Download the Target map "emd_1737.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.265083,0.010974,-0.964163 77.658882 center 0,0,0 model #1
    move -236.438851,74.962549,-141.156274 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!