Pairwise fitting emdb-1737 on pdb-3j0c by gmfit










Pairwise fitting of target emdb-1737 on reference pdb-3j0c by gmfit(PID:3703943).





RANK[1] Corr.Coeff:0.446

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(pdb-3j0c)

display:



color:


b'MODELS OF E1, E2 AND CP OF VENEZUELAN EQUINE ENCEPHALITIS VIRUS TC-83 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.446
0.442
0.434
0.432
0.410
0.401
0.399
0.397
0.378
0.373







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0c"(PDB-format) or 
 "3j0c"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.006963,-0.873067,-0.487550 104.501598 center 0,0,0 model #1
move 131.872864,-43.157649,-484.701435 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!