Pairwise fitting emdb-1737 on pdb-2go5 by gmfit










Pairwise fitting of target emdb-1737 on reference pdb-2go5 by gmfit(PID:2551502).





RANK[1] Corr.Coeff:0.384

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(pdb-2go5)

display:



color:


b'STRUCTURE OF SIGNAL RECOGNITION PARTICLE RECEPTOR (SR) IN             ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.384
0.357
0.334
0.325
0.277
0.277
0.267
0.256
0.254
0.250







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2go5"(PDB-format) or 
 "2go5"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.316624,0.557882,0.767149 80.935021 center 0,0,0 model #1
move 154.106807,-252.403439,-19.609213 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!