Pairwise fitting emdb-1737 on emdb-3115 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-3115 by gmfit(PID:4025779).





RANK[1] Corr.Coeff:0.567

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-3115)

display:



color:


the P-lobe of RNA polymerase II pre-initiation complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.567
0.521
0.500
0.500
0.499
0.499
0.491
0.489
0.489
0.485







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3115.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.957030,0.288377,0.030525 176.808465 center 0,0,0 model #1
move 142.951248,455.455852,416.246320 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!