Pairwise fitting emdb-1737 on emdb-2305 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-2305 by gmfit(PID:1485638).





RANK[1] Corr.Coeff:0.517

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-2305)

display:



color:


Structural visualization of key steps in human transcription initiation [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.517
0.481
0.481
0.465
0.461
0.448
0.425
0.423
0.421
0.389







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2305.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.081531,-0.991808,-0.098339 145.682943 center 0,0,0 model #1
move 460.878399,58.974424,199.500348 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!