Pairwise fitting emdb-1737 on emdb-1743 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-1743 by gmfit(PID:4089395).





RANK[1] Corr.Coeff:0.946

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-1743)

display:



color:


Pyruvate carboxylase from S. aureus after addition of actyl-CoA, AMP-PNP, KHCO3 and oxaloacetate (based on a subset obtained after maximum likelihood based classification) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.946
0.938
0.909
0.828
0.717
0.717
0.691
0.691
0.346
0.346







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1743.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.003522,0.001686,-0.999992 175.578951 center 0,0,0 model #1
move 320.231680,345.566847,-12.030636 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1743)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(4089395)]