Pairwise fitting emdb-1718 on pdb-4v6s by gmfit










Pairwise fitting of target emdb-1718 on reference pdb-4v6s by gmfit(PID:4137338).





RANK[1] Corr.Coeff:0.855

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(pdb-4v6s)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.855
0.819
0.716
0.703
0.690
0.689
0.685
0.661
0.652
0.645







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6s"(PDB-format) or 
 "4v6s"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.792839,0.184727,-0.580760 139.137120 center 0,0,0 model #1
move -49.756807,278.401331,138.534446 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!