Pairwise fitting emdb-1717 on pdb-4v72 by gmfit










Pairwise fitting of target emdb-1717 on reference pdb-4v72 by gmfit(PID:3922072).





RANK[1] Corr.Coeff:0.857

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(pdb-4v72)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.857
0.717
0.701
0.699
0.692
0.690
0.683
0.676
0.670
0.662







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v72"(PDB-format) or 
 "4v72"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.181185,-0.946544,0.266884 2.524472 center 0,0,0 model #1
move 6.146972,-7.855145,-3.613124 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!