Pairwise fitting emdb-1717 on pdb-4v6z by gmfit










Pairwise fitting of target emdb-1717 on reference pdb-4v6z by gmfit(PID:3820685).





RANK[1] Corr.Coeff:0.870

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(pdb-4v6z)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.870
0.699
0.693
0.691
0.685
0.683
0.672
0.647
0.644
0.632







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6z"(PDB-format) or 
 "4v6z"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.378668,-0.405693,0.831880 2.694978 center 0,0,0 model #1
move 9.829926,-13.952114,-7.179995 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!