Pairwise fitting emdb-1717 on emdb-1262 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-1262 by gmfit(PID:4128111).





RANK[1] Corr.Coeff:0.753

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

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color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-1262)

display:



color:


Following the signal sequence from ribosomal tunnel exit to signal recognition particle. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.753
0.750
0.667
0.653
0.647
0.644
0.637
0.621
0.613
0.607







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1262.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.133042,0.951320,0.278013 91.451715 center 0,0,0 model #1
move -154.761648,-262.626711,82.535478 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1262)]

[Download the target GMM(emdb 1717)]

[Download gmfit result file(4128111)]