Pairwise fitting emdb-1711 on pdb-5fwp by gmfit



Pairwise fitting of target emdb-1711 on reference pdb-5fwp by gmfit(PID:1593763).

RANK[1] Corr.Coeff:0.633 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(pdb-5fwp)
display:
color:
b'ATOMIC CRYOEM STRUCTURE OF HSP90-CDC37-CDK4 COMPLEX ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.633 0.584 0.584 0.563 0.562 0.548 0.543 0.541 0.535 0.531

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5fwp"(PDB-format) or "5fwp"(mmCIF-format), and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.053696,0.922389,0.382511 159.277638 center 0,0,0 model #1
    move 168.378711,168.999015,170.726757 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!