Pairwise fitting emdb-1711 on pdb-3lu0 by gmfit



Pairwise fitting of target emdb-1711 on reference pdb-3lu0 by gmfit(PID:1352088).

RANK[1] Corr.Coeff:0.688 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(pdb-3lu0)
display:
color:
b'MOLECULAR MODEL OF ESCHERICHIA COLI CORE RNA POLYMERASE ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.688 0.673 0.630 0.614 0.609 0.606 0.603 0.597 0.583 0.583

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3lu0"(PDB-format) or "3lu0"(mmCIF-format), and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.074505,-0.174073,0.981910 170.507431 center 0,0,0 model #1
    move 135.240105,114.467031,128.097159 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!