Pairwise fitting emdb-1711 on pdb-1mhs by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-1mhs by gmfit(PID:3488903).





RANK[1] Corr.Coeff:0.630

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-1mhs)

display:



color:


b'MODEL OF NEUROSPORA CRASSA PROTON ATPASE                              ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.630
0.601
0.566
0.566
0.541
0.530
0.520
0.492
0.491
0.481







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1mhs"(PDB-format) or 
 "1mhs"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.705604,0.704259,-0.078378 177.891583 center 0,0,0 model #1
move 32.857958,120.860482,53.890518 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!