Pairwise fitting emdb-1711 on emdb-6056 by gmfit



Pairwise fitting of target emdb-1711 on reference emdb-6056 by gmfit(PID:1366894).

RANK[1] Corr.Coeff:0.586 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(emdb-6056)
display:
color:
Negative stain EM structure of the yeast dynein motor domain in the presence of ATP [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.586 0.558 0.523 0.515 0.506 0.469 0.466 0.463 0.457 0.453

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6056.map.gz", and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.896676,-0.398152,0.193513 85.177365 center 0,0,0 model #1
    move 133.302144,135.824445,124.955256 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!