Pairwise fitting emdb-1711 on emdb-2678 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-2678 by gmfit(PID:593972).





RANK[1] Corr.Coeff:0.604

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-2678)

display:



color:


Three-dimensional structure of human gamma-secretase at 5.4 angstrom resoltuion [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.604
0.555
0.540
0.512
0.504
0.501
0.497
0.495
0.489
0.480







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2678.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.916033,-0.302453,-0.263449 86.313682 center 0,0,0 model #1
move 121.331418,134.554354,133.433428 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!