Pairwise fitting emdb-1618 on pdb-4bom by gmfit










Pairwise fitting of target emdb-1618 on reference pdb-4bom by gmfit(PID:2158249).





RANK[1] Corr.Coeff:0.545

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(pdb-4bom)

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b'STRUCTURE OF HERPESVIRUS FUSION GLYCOPROTEIN B-BILAYER COMPLEX        ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.545
0.529
0.504
0.485
0.482
0.456
0.424
0.423
0.238
0.166







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4bom"(PDB-format) or 
 "4bom"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.046738,-0.009982,-0.998857 175.949760 center 0,0,0 model #1
move 97.424687,122.377539,-122.481754 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!