Pairwise fitting emdb-1618 on pdb-3edl by gmfit










Pairwise fitting of target emdb-1618 on reference pdb-3edl by gmfit(PID:3682646).





RANK[1] Corr.Coeff:0.579

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(pdb-3edl)

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b'KINESIN13-MICROTUBULE RING COMPLEX                                    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.579
0.537
0.468
0.468
0.460
0.448
0.445
0.423
0.316
0.182







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3edl"(PDB-format) or 
 "3edl"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.589469,0.616534,-0.521931 158.092742 center 0,0,0 model #1
move 155.930187,580.748221,199.294517 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!