Pairwise fitting emdb-1618 on pdb-1zo1 by gmfit










Pairwise fitting of target emdb-1618 on reference pdb-1zo1 by gmfit(PID:1551002).





RANK[1] Corr.Coeff:0.445

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(pdb-1zo1)

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color:


b'IF2, IF1, AND TRNA FITTED TO CRYO-EM DATA OF E. COLI 70S INITIATION   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.445
0.383
0.370
0.351
0.324
0.309
0.292
0.274
0.207
0.130







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1zo1"(PDB-format) or 
 "1zo1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.988208,-0.129850,0.081140 129.851313 center 0,0,0 model #1
move -137.437195,-34.536894,141.594696 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!