Pairwise fitting emdb-1618 on emdb-1390 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-1390 by gmfit(PID:3131932).





RANK[1] Corr.Coeff:0.380

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-1390)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.380
0.352
0.332
0.305
0.297
0.290
0.268
0.267
0.173
0.156







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1390.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.572340,-0.490896,0.656846 78.644613 center 0,0,0 model #1
move 63.237907,6.275021,-194.255652 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!