Pairwise fitting emdb-1618 on emdb-1386 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-1386 by gmfit(PID:3944356).





RANK[1] Corr.Coeff:0.395

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-1386)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.395
0.342
0.326
0.309
0.296
0.292
0.275
0.267
0.151
0.148







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1386.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.568675,-0.507894,0.647034 76.958338 center 0,0,0 model #1
move 63.624297,1.556267,-194.339295 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!