Pairwise fitting emdb-1618 on emdb-1108 by gmfit



Pairwise fitting of target emdb-1618 on reference emdb-1108 by gmfit(PID:1321461).

RANK[1] Corr.Coeff:0.585 [JSmol] [Molmil]
TARGET(emdb-1618)
display:
color:
3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1618)]
REFERENCE(emdb-1108)
display:
color:
Structural basis of pore formation by the bacterial toxin pneumolysin. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.585 0.521 0.517 0.516 0.499 0.474 0.463 0.438 0.244 0.230

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1108.map.gz", and read it.
  2. Download the Target map "emd_1618.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.384241,0.896886,0.218986 160.592557 center 0,0,0 model #1
    move 187.561278,90.292779,122.621504 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!